Ligand validation:2HOD

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 2HOD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2HOD_NAG_E_470	57%	59%	0.143	0.918	0.75	0.81	1	-	4	1	100%	0.9333
2HOD_NAG_H_470	40%	58%	0.189	0.898	0.77	0.83	-	1	3	0	100%	0.9333
2HOD_NAG_B_470	32%	61%	0.152	0.824	0.64	0.86	-	1	4	0	100%	0.9333
2HOD_NAG_K_470	17%	59%	0.223	0.803	0.64	0.93	-	1	2	0	100%	0.9333
2HPC_NAG_K_470	50%	62%	0.169	0.919	0.5	0.94	-	1	3	0	100%	0.9333
1LT9_NAG_E_3	22%	66%	0.119	0.73	0.57	0.75	-	1	0	0	100%	0.9333
2Z4E_NAG_E_501	15%	73%	0.245	0.805	0.51	0.52	-	-	1	0	100%	0.9333
1RF0_NAG_E_500	11%	66%	0.28	0.802	0.58	0.72	-	-	0	0	100%	0.9333
3E1I_NAG_E_501	5%	2%	0.25	0.661	1.68	5.04	2	5	0	1	100%	1
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5F9W_NAG_A_510	100%	88%	0.023	0.994	0.24	0.43	-	-	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.