GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 2HJG designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2HJG_GDP_A_500 | 73% | 50% | 0.126 | 0.952 | 0.98 | 0.95 | 1 | 2 | 1 | 0 | 100% | 1 |
| 2HJG_GDP_A_800 | 31% | 47% | 0.215 | 0.882 | 0.96 | 1.08 | 2 | 4 | 1 | 0 | 100% | 1 |
| 4DCS_GDP_A_501 | 86% | 46% | 0.09 | 0.96 | 0.99 | 1.1 | 2 | 3 | 0 | 0 | 100% | 1 |
| 4DCU_GDP_A_501 | 85% | 45% | 0.111 | 0.975 | 0.94 | 1.17 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4DCT_GDP_A_501 | 71% | 41% | 0.115 | 0.936 | 0.92 | 1.35 | - | 6 | 2 | 0 | 100% | 1 |
| 5MBS_GDP_A_501 | 45% | 41% | 0.206 | 0.938 | 0.99 | 1.3 | 1 | 3 | 0 | 0 | 100% | 0.8036 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 5KY2_GDP_A_403 | 100% | 48% | 0.036 | 0.989 | 0.98 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
