XYP: beta-D-xylopyranose
XYP is a Ligand Of Interest in 2CDC designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2CDC_XYP_B_1369 | 99% | 52% | 0.044 | 0.982 | 1.05 | 0.69 | 1 | - | 0 | 0 | 100% | 1 |
| 2CDC_XYP_C_1369 | 98% | 54% | 0.047 | 0.98 | 1.05 | 0.61 | - | - | 0 | 0 | 100% | 1 |
| 2CDC_XYP_A_1369 | 98% | 45% | 0.046 | 0.974 | 1.14 | 0.89 | 1 | - | 0 | 0 | 100% | 0.5 |
| 2CDC_XYP_D_1370 | 96% | 49% | 0.057 | 0.972 | 1.12 | 0.77 | 1 | - | 0 | 0 | 100% | 0.5 |
| 4PMY_XYP_A_401 | 100% | 73% | 0.017 | 0.996 | 0.47 | 0.45 | - | - | 0 | 0 | 100% | 1 |
| 1OD8_XYP_A_1311 | 100% | 64% | 0.027 | 0.992 | 0.69 | 0.55 | - | - | 0 | 0 | 100% | 1 |
| 3FYU_XYP_C_1001 | 100% | 48% | 0.033 | 0.993 | 1.11 | 0.8 | - | - | 0 | 0 | 100% | 1 |
| 5L6G_XYP_A_510 | 100% | 65% | 0.033 | 0.988 | 0.42 | 0.77 | - | - | 0 | 0 | 100% | 1 |
| 1W9T_XYP_B_1148 | 100% | 20% | 0.022 | 0.994 | 1.19 | 2.06 | 1 | 5 | 6 | 0 | 90% | 1 |














