DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 2AXT designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2AXT_DGD_H_208 | 58% | 24% | 0.086 | 0.896 | 1.48 | 1.55 | 10 | 8 | 3 | 3 | 82% | 1 |
| 2AXT_DGD_h_5208 | 58% | 25% | 0.083 | 0.892 | 1.39 | 1.56 | 9 | 9 | 3 | 3 | 82% | 1 |
| 2AXT_DGD_C_509 | 54% | 34% | 0.089 | 0.876 | 1.12 | 1.4 | 7 | 5 | 10 | 3 | 86% | 1 |
| 2AXT_DGD_c_5509 | 52% | 29% | 0.084 | 0.861 | 1.35 | 1.39 | 7 | 6 | 9 | 3 | 86% | 1 |
| 2AXT_DGD_c_5507 | 46% | 25% | 0.094 | 0.86 | 1.47 | 1.46 | 9 | 6 | 5 | 3 | 80% | 1 |
| 2AXT_DGD_C_507 | 43% | 27% | 0.104 | 0.86 | 1.35 | 1.47 | 8 | 7 | 6 | 3 | 80% | 1 |
| 2AXT_DGD_c_5508 | 40% | 21% | 0.108 | 0.867 | 1.48 | 1.71 | 8 | 10 | 4 | 3 | 71% | 1 |
| 2AXT_DGD_C_508 | 39% | 22% | 0.116 | 0.874 | 1.43 | 1.67 | 9 | 11 | 2 | 3 | 71% | 1 |
| 5V2C_DGD_C_516 | 97% | 40% | 0.047 | 0.983 | 0.91 | 1.29 | 5 | 10 | 0 | 0 | 94% | 1 |
| 5GTI_DGD_h_103 | 94% | 49% | 0.05 | 0.967 | 0.9 | 0.97 | 3 | 3 | 0 | 0 | 94% | 1 |
| 5GTH_DGD_h_102 | 94% | 47% | 0.05 | 0.966 | 0.9 | 1.03 | 4 | 5 | 0 | 0 | 94% | 1 |
| 6JLO_DGD_c_519 | 93% | 48% | 0.067 | 0.981 | 0.83 | 1.05 | 2 | 7 | 6 | 0 | 94% | 1 |
| 8IRF_DGD_C_517 | 91% | 44% | 0.06 | 0.963 | 0.84 | 1.2 | 2 | 6 | 1 | 0 | 94% | 0.5 |
| 7M76_DGD_L_207 | 98% | 40% | 0.05 | 0.984 | 1.05 | 1.18 | 3 | 7 | 3 | 0 | 100% | 1 |
| 1PPR_DGD_O_625 | 92% | 52% | 0.066 | 0.965 | 0.78 | 0.96 | 1 | 5 | 2 | 0 | 100% | 1 |
