Ligand validation:1YKP

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
1YKP_DHB_H_3550	14%	49%	0.247	0.918	1.04	0.82	-	1	6	100%	1
1YKP_DHB_D_1550	14%	49%	0.215	0.859	0.96	0.88	-	1	1	100%	1
1YKP_DHB_L_5550	10%	49%	0.243	0.869	0.98	0.86	-	1	3	100%	1
1YKP_DHB_A_550	10%	45%	0.256	0.888	1.12	0.92	-	1	7	100%	1
1YKP_DHB_J_4550	8%	51%	0.276	0.899	0.89	0.86	-	1	3	100%	1
1YKP_DHB_F_2550	8%	43%	0.273	0.892	1.25	0.88	1	2	1	100%	1
1YKN_DHB_H_3550	50%	32%	0.112	0.897	1.83	0.91	2	-	5	100%	1
3LMX_DHB_N_2	49%	27%	0.108	0.883	1.94	1.06	1	1	0	100%	0.95
1YKL_DHB_F_2550	36%	30%	0.138	0.872	1.69	1.11	2	-	5	100%	1
3MV6_DHB_N_540	34%	33%	0.135	0.855	1.5	1.17	1	2	2	100%	0.8
4EYK_DHB_A_401	97%	29%	0.034	0.985	1.64	1.21	1	1	0	100%	1
21ZG_DHB_A_402	97%	51%	0.037	0.986	0.81	0.93	-	-	1	100%	1
6S33_DHB_B_602	97%	37%	0.037	0.985	0.95	1.44	-	3	0	100%	1
3O5U_DHB_A_258	93%	31%	0.048	0.983	1.34	1.42	2	3	0	100%	1
4FHT_DHB_A_201	90%	56%	0.047	0.966	0.73	0.78	-	-	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

1YKP | pdb_00001ykp