HDD: CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE
HDD is a Ligand Of Interest in 1YE9 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1YE9_HDD_N_760 | 78% | 1% | 0.13 | 0.972 | 3.08 | 4.37 | 12 | 16 | 9 | 0 | 100% | 1 |
1YE9_HDD_E_760 | 76% | 1% | 0.137 | 0.975 | 3.25 | 4.87 | 14 | 18 | 12 | 0 | 100% | 1 |
1YE9_HDD_F_760 | 73% | 1% | 0.135 | 0.963 | 2.78 | 4.37 | 11 | 15 | 25 | 0 | 100% | 1 |
1YE9_HDD_G_760 | 72% | 2% | 0.143 | 0.966 | 3 | 4.13 | 12 | 16 | 9 | 0 | 100% | 1 |
1YE9_HDD_P_760 | 68% | 1% | 0.151 | 0.964 | 3.2 | 5.06 | 16 | 18 | 5 | 0 | 100% | 1 |
1YE9_HDD_H_760 | 68% | 1% | 0.151 | 0.962 | 3.03 | 4.33 | 14 | 15 | 14 | 0 | 100% | 1 |
1YE9_HDD_O_760 | 67% | 1% | 0.151 | 0.96 | 2.95 | 4.31 | 17 | 13 | 18 | 0 | 100% | 1 |
1YE9_HDD_M_760 | 67% | 1% | 0.153 | 0.961 | 3.06 | 4.31 | 15 | 14 | 17 | 0 | 100% | 1 |
5BV2_HDD_P_801 | 100% | 11% | 0.052 | 0.995 | 1.59 | 2.59 | 6 | 11 | 6 | 0 | 100% | 1 |
5XY4_HDD_C_701 | 99% | 7% | 0.057 | 0.989 | 1.9 | 2.83 | 12 | 16 | 2 | 0 | 100% | 1 |
5XZM_HDD_B_701 | 99% | 24% | 0.059 | 0.991 | 1.4 | 1.72 | 5 | 10 | 0 | 0 | 100% | 1 |
3P9P_HDD_A_760 | 99% | 8% | 0.06 | 0.991 | 2.39 | 2.33 | 11 | 9 | 2 | 0 | 100% | 0.25 |
3PQ8_HDD_D_760 | 99% | 7% | 0.059 | 0.989 | 2.37 | 2.39 | 10 | 11 | 9 | 0 | 100% | 0.5 |