NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE
NAD is a Ligand Of Interest in 1Y9E designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1Y9E_NAD_C_3255 | 20% | 7% | 0.18 | 0.92 | 3.15 | 1.8 | 4 | 4 | 4 | 0 | 25% | 0.25 |
1Y9E_NAD_D_4255 | 19% | 4% | 0.178 | 0.906 | 2.21 | 3.53 | 4 | 2 | 0 | 0 | 25% | 0.25 |
1Y9E_NAD_B_2255 | 18% | 12% | 0.175 | 0.899 | 1.5 | 2.52 | 2 | 3 | 5 | 0 | 25% | 0.25 |
1Y9E_NAD_A_1255 | 14% | 2% | 0.197 | 0.886 | 2.1 | 4.46 | 2 | 4 | 5 | 0 | 25% | 0.25 |
1Y9E_NAD_F_6255 | 13% | 2% | 0.198 | 0.869 | 3.2 | 3.83 | 4 | 4 | 5 | 0 | 25% | 0.25 |
1Y9E_NAD_E_5255 | 4% | 0% | 0.258 | 0.775 | 4.46 | 4.63 | 5 | 6 | 0 | 0 | 25% | 0.25 |
3CMC_NAD_R_408 | 100% | 20% | 0.016 | 0.998 | 1.63 | 1.74 | 4 | 9 | 0 | 0 | 100% | 1 |
4RQU_NAD_B_403 | 100% | 3% | 0.019 | 0.997 | 3.51 | 2.61 | 13 | 18 | 0 | 0 | 100% | 1 |
3EC7_NAD_A_400 | 100% | 18% | 0.025 | 0.995 | 1.8 | 1.74 | 5 | 8 | 1 | 0 | 100% | 1 |
4URF_NAD_A_1249 | 100% | 44% | 0.034 | 0.995 | 0.96 | 1.2 | 2 | 4 | 0 | 0 | 100% | 1 |
2C5A_NAD_B_1374 | 100% | 23% | 0.039 | 0.992 | 1.34 | 1.84 | 6 | 7 | 1 | 0 | 100% | 1 |