DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 1PPR designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1PPR_DGD_O_625 | 81% | 51% | 0.066 | 0.965 | 0.78 | 0.96 | 1 | 5 | 2 | 0 | 100% | 1 |
| 1PPR_DGD_N_625 | 81% | 51% | 0.065 | 0.963 | 0.79 | 0.97 | 1 | 5 | 1 | 0 | 100% | 1 |
| 1PPR_DGD_M_625 | 79% | 53% | 0.068 | 0.962 | 0.74 | 0.89 | - | 4 | 1 | 0 | 100% | 1 |
| 1PPR_DGD_O_615 | 44% | 40% | 0.131 | 0.906 | 0.86 | 1.38 | 1 | 7 | 12 | 3 | 100% | 1 |
| 1PPR_DGD_N_615 | 43% | 42% | 0.126 | 0.894 | 0.77 | 1.38 | 1 | 7 | 12 | 3 | 100% | 1 |
| 1PPR_DGD_M_615 | 38% | 40% | 0.138 | 0.889 | 0.85 | 1.38 | 2 | 6 | 15 | 3 | 100% | 1 |
| 2X21_DGD_M_615 | 62% | 36% | 0.099 | 0.938 | 1.06 | 1.41 | 3 | 9 | 0 | 0 | 100% | 0.96 |
| 2X1Z_DGD_M_1152 | 58% | 39% | 0.099 | 0.923 | 0.98 | 1.32 | 3 | 8 | 12 | 0 | 100% | 1 |
| 2X20_DGD_M_615 | 56% | 37% | 0.101 | 0.916 | 0.94 | 1.48 | 3 | 13 | 16 | 0 | 100% | 1 |
| 7M76_DGD_L_207 | 92% | 41% | 0.05 | 0.984 | 1.05 | 1.18 | 3 | 7 | 3 | 0 | 100% | 1 |
| 5V2C_DGD_C_516 | 89% | 41% | 0.047 | 0.983 | 0.91 | 1.29 | 5 | 10 | 0 | 0 | 94% | 1 |
| 5GTI_DGD_h_103 | 84% | 49% | 0.05 | 0.967 | 0.9 | 0.97 | 3 | 3 | 0 | 0 | 94% | 1 |
| 5GTH_DGD_h_102 | 84% | 48% | 0.05 | 0.966 | 0.9 | 1.03 | 4 | 5 | 0 | 0 | 94% | 1 |
| 8IRF_DGD_C_517 | 79% | 45% | 0.06 | 0.963 | 0.84 | 1.2 | 2 | 6 | 1 | 0 | 94% | 0.5 |
