PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 1P3W designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1P3W_PLP_B_764 | 80% | 5% | 0.113 | 0.961 | 1.9 | 3.49 | 3 | 10 | 0 | 0 | 100% | 0.9375 |
1P3W_PLP_A_764 | 78% | 5% | 0.116 | 0.959 | 1.95 | 3.46 | 3 | 10 | 0 | 0 | 100% | 0.9375 |
3LVL_PLP_B_764 | 80% | 18% | 0.113 | 0.961 | 2.3 | 1.27 | 2 | 2 | 1 | 0 | 100% | 0.9375 |
3LVM_PLP_A_764 | 63% | 34% | 0.136 | 0.932 | 1.37 | 1.22 | 2 | 3 | 0 | 0 | 100% | 0.9375 |
3LVJ_PLP_A_764 | 29% | 43% | 0.238 | 0.896 | 1.01 | 1.21 | - | 1 | 1 | 0 | 100% | 0.9375 |
3LVK_PLP_A_764 | 9% | 41% | 0.343 | 0.829 | 0.87 | 1.39 | - | 1 | 3 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |