UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 1NKH designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1NKH_UDP_D_810 | 95% | 32% | 0.077 | 0.979 | 1.23 | 1.47 | 2 | 7 | 3 | 0 | 100% | 1 |
| 1NKH_UDP_B_809 | 89% | 29% | 0.094 | 0.972 | 1.32 | 1.53 | 3 | 7 | 1 | 0 | 100% | 1 |
| 1NKH_UDP_B_811 | 32% | 31% | 0.165 | 0.837 | 1.26 | 1.48 | 2 | 6 | 2 | 0 | 100% | 1 |
| 1NKH_UDP_D_812 | 12% | 30% | 0.19 | 0.716 | 1.31 | 1.49 | 3 | 7 | 0 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.046 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_A_401 | 99% | 40% | 0.049 | 0.989 | 1.09 | 1.23 | 1 | 3 | 0 | 0 | 100% | 1 |
