U: URIDINE-5'-MONOPHOSPHATE
U is a Ligand Of Interest in 1M8V designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1M8V_U_E_414 | 57% | 83% | 0.147 | 0.93 | 0.33 | 0.45 | - | - | 3 | 0 | 95% | 0.8757 |
1M8V_U_C_412 | 41% | 88% | 0.163 | 0.887 | 0.3 | 0.36 | - | - | 4 | 0 | 95% | 0.8852 |
1M8V_U_A_410 | 38% | 82% | 0.185 | 0.897 | 0.27 | 0.52 | - | - | 5 | 0 | 95% | 0.8705 |
1M8V_U_H_417 | 33% | 79% | 0.185 | 0.87 | 0.29 | 0.56 | - | - | 2 | 0 | 95% | 0.9071 |
1M8V_U_F_415 | 32% | 81% | 0.17 | 0.85 | 0.3 | 0.51 | - | - | 3 | 0 | 95% | 0.8657 |
1M8V_U_K_476 | 28% | 52% | 0.19 | 0.852 | 0.45 | 1.39 | - | 3 | 8 | 0 | 95% | 0.9152 |
1M8V_U_M_423 | 24% | 87% | 0.198 | 0.836 | 0.33 | 0.37 | - | - | 2 | 0 | 95% | 0.919 |
1M8V_U_L_421 | 24% | 81% | 0.206 | 0.842 | 0.32 | 0.5 | - | - | 5 | 0 | 95% | 0.901 |
1M8V_U_G_416 | 23% | 81% | 0.212 | 0.841 | 0.28 | 0.54 | - | 1 | 2 | 0 | 95% | 0.9252 |
1M8V_U_D_476 | 22% | 88% | 0.248 | 0.877 | 0.23 | 0.43 | - | - | 3 | 0 | 95% | 0.861 |
1M8V_U_B_411 | 21% | 85% | 0.2 | 0.818 | 0.28 | 0.45 | - | - | 8 | 0 | 95% | 0.8967 |
1M8V_U_I_418 | 16% | 82% | 0.238 | 0.82 | 0.28 | 0.52 | - | - | 4 | 0 | 95% | 0.8176 |
1M8V_U_J_419 | 11% | 80% | 0.277 | 0.804 | 0.26 | 0.58 | - | 1 | 8 | 0 | 95% | 0.84 |
1M8V_U_M_422 | 10% | 79% | 0.221 | 0.73 | 0.29 | 0.56 | - | - | 3 | 0 | 95% | 0.9067 |
7OQF_U_B_505 | 100% | 43% | 0.038 | 0.995 | 1.13 | 1.1 | 2 | 2 | 0 | 0 | 100% | 0.43 |
7OQM_U_B_504 | 100% | 43% | 0.039 | 0.996 | 1.11 | 1.11 | 2 | 1 | 0 | 0 | 100% | 1 |
7AM9_U_A_502 | 100% | 41% | 0.04 | 0.997 | 1.15 | 1.14 | 1 | 1 | 0 | 0 | 100% | 0.28 |
7OQN_U_B_504 | 100% | 40% | 0.04 | 0.996 | 1.2 | 1.12 | 2 | 1 | 0 | 0 | 100% | 1 |
6ZX0_U_A_502 | 100% | 42% | 0.039 | 0.991 | 1.1 | 1.14 | 1 | 2 | 0 | 0 | 100% | 0.25 |