NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 1KDG designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1KDG_NAG_A_803 | 89% | 47% | 0.073 | 0.953 | 0.92 | 1.13 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
1KDG_NAG_B_803 | 79% | 37% | 0.118 | 0.965 | 1.08 | 1.39 | 1 | 3 | 0 | 0 | 100% | 0.9333 |
1KDG_NAG_A_802 | 57% | 31% | 0.126 | 0.899 | 1.3 | 1.46 | 3 | 4 | 0 | 0 | 100% | 0.9333 |
1KDG_NAG_B_804 | 18% | 33% | 0.22 | 0.81 | 0.77 | 1.85 | - | 4 | 1 | 0 | 100% | 0.9333 |
1KDG_NAG_A_804 | 10% | 42% | 0.306 | 0.815 | 0.75 | 1.48 | 1 | 3 | 0 | 0 | 100% | 0.9333 |
1NAA_NAG_A_802 | 82% | 39% | 0.086 | 0.94 | 0.76 | 1.58 | - | 3 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |