UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 1F6D designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1F6D_UDP_B_2377 | 87% | 56% | 0.109 | 0.982 | 0.83 | 0.86 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1F6D_UDP_C_3377 | 82% | 51% | 0.111 | 0.967 | 0.88 | 1 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1F6D_UDP_A_1377 | 11% | 53% | 0.241 | 0.757 | 0.74 | 1.06 | 1 | 3 | 1 | 0 | 100% | 1 |
| 1F6D_UDP_D_4377 | 8% | 53% | 0.291 | 0.759 | 0.74 | 1.07 | 1 | 3 | 2 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.046 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_A_401 | 99% | 40% | 0.049 | 0.989 | 1.09 | 1.23 | 1 | 3 | 0 | 0 | 100% | 1 |
