DGP: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DGP is a Ligand Of Interest in 1DEK designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1DEK_DGP_A_301 | 99% | 32% | 0.052 | 0.985 | 1.39 | 1.32 | 3 | 2 | 1 | 0 | 100% | 1 |
1DEK_DGP_B_301 | 24% | 38% | 0.207 | 0.835 | 1.31 | 1.13 | 3 | 2 | 4 | 0 | 100% | 0.7 |
1DEL_DGP_A_301 | 43% | 40% | 0.184 | 0.906 | 1.07 | 1.27 | 2 | 3 | 2 | 0 | 100% | 1 |
7ODX_DGP_A_401 | 92% | 22% | 0.072 | 0.962 | 0.98 | 2.21 | 1 | 5 | 0 | 0 | 100% | 1 |
6TNH_DGP_B_401 | 91% | 64% | 0.092 | 0.98 | 0.8 | 0.59 | - | - | 1 | 0 | 100% | 1 |
1Z4P_DGP_X_1 | 90% | 16% | 0.09 | 0.974 | 1.33 | 2.32 | 2 | 8 | 2 | 0 | 100% | 1 |
6C8D_DGP_A_102 | 84% | 13% | 0.088 | 0.949 | 2.25 | 1.68 | 5 | 6 | 0 | 0 | 100% | 1 |
2JAO_DGP_A_1201 | 72% | 28% | 0.115 | 0.937 | 1.38 | 1.53 | 3 | 6 | 0 | 0 | 100% | 0.8913 |