XYP: beta-D-xylopyranose
XYP is a Ligand Of Interest in 1B3X designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1B3X_XYP_A_607 | 3% | 75% | 0.277 | 0.591 | 0.51 | 0.46 | - | - | 0 | 0 | 100% | 0.8 |
1B3V_XYP_A_523 | 51% | 84% | 0.17 | 0.926 | 0.38 | 0.39 | - | - | 0 | 0 | 100% | 1 |
1B3Z_XYP_A_658 | 3% | 72% | 0.285 | 0.63 | 0.59 | 0.48 | - | - | 0 | 0 | 100% | 0.8 |
1OD8_XYP_A_1311 | 100% | 64% | 0.047 | 0.992 | 0.75 | 0.64 | - | - | 0 | 0 | 100% | 1 |
1V0M_XYP_A_1304 | 100% | 71% | 0.035 | 0.993 | 0.82 | 0.33 | - | - | 0 | 0 | 90% | 0.9 |
2WYS_XYP_A_1001 | 99% | 38% | 0.052 | 0.983 | 0.69 | 1.7 | - | 4 | 3 | 0 | 100% | 1 |
1V0N_XYP_A_1306 | 98% | 60% | 0.048 | 0.989 | 0.76 | 0.78 | - | - | 0 | 0 | 90% | 0.9 |
1V0L_XYP_A_1305 | 98% | 72% | 0.055 | 0.992 | 0.52 | 0.57 | - | - | 0 | 0 | 90% | 0.9 |