SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 11YO designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11YO_SQD_A_409 | 66% | 23% | 0.089 | 0.943 | 1.05 | 2.09 | 5 | 16 | 0 | 0 | 96% | 1 |
| 11YO_SQD_a_412 | 61% | 26% | 0.096 | 0.922 | 1.01 | 1.95 | 5 | 13 | 0 | 0 | 100% | 1 |
| 11YO_SQD_l_101 | 59% | 17% | 0.086 | 0.915 | 1.1 | 2.39 | 3 | 15 | 8 | 0 | 91% | 1 |
| 11YO_SQD_B_723 | 45% | 28% | 0.114 | 0.871 | 1 | 1.88 | 3 | 12 | 0 | 0 | 100% | 1 |
| 11YO_SQD_f_102 | 32% | 27% | 0.127 | 0.886 | 1.19 | 1.74 | 4 | 11 | 0 | 0 | 76% | 1 |
| 11YO_SQD_A_410 | 32% | 39% | 0.125 | 0.891 | 1.03 | 1.28 | 3 | 4 | 0 | 0 | 72% | 1 |
| 11YO_SQD_D_410 | 29% | 25% | 0.124 | 0.89 | 1.09 | 1.96 | 3 | 11 | 0 | 0 | 67% | 1 |
| 11YO_SQD_a_414 | 27% | 34% | 0.121 | 0.869 | 1.18 | 1.4 | 2 | 5 | 2 | 0 | 67% | 1 |
| 3WU2_SQD_A_412 | 66% | 25% | 0.089 | 0.932 | 0.86 | 2.15 | 2 | 17 | 5 | 0 | 100% | 1 |
| 8GN2_SQD_A_411 | 57% | 32% | 0.121 | 0.943 | 0.96 | 1.71 | 3 | 12 | 3 | 0 | 100% | 1 |
| 9LP8_SQD_a_415 | 55% | 31% | 0.116 | 0.926 | 0.96 | 1.74 | 3 | 11 | 9 | 0 | 100% | 1 |
| 8GN1_SQD_A_411 | 53% | 31% | 0.118 | 0.939 | 1.03 | 1.71 | 3 | 10 | 3 | 0 | 91% | 1 |
| 8GN0_SQD_a_2615 | 52% | 29% | 0.116 | 0.936 | 1.01 | 1.79 | 3 | 12 | 1 | 0 | 89% | 1 |
| 5V2C_SQD_A_612 | 85% | 23% | 0.062 | 0.972 | 1.04 | 2.08 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 79% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 2 | 0 | 100% | 1 |
| 5GTH_SQD_A_410 | 78% | 29% | 0.065 | 0.945 | 0.97 | 1.86 | 3 | 12 | 3 | 0 | 100% | 1 |
| 5WS5_SQD_A_410 | 74% | 28% | 0.081 | 0.955 | 0.94 | 1.94 | 3 | 12 | 6 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 73% | 30% | 0.084 | 0.954 | 0.94 | 1.81 | 3 | 13 | 8 | 0 | 100% | 1 |
