Skip to main content

 9T0I | pdb_00009t0i

Spraguea lophii ribosome dimer, conformation 1.


ELECTRON MICROSCOPY
Sample
Ribosome
Specimen Preparation
Sample Aggregation StateCELL
Vitrification InstrumentFEI VITROBOT MARK IV
Cryogen NameETHANE
Sample Vitrification Detailsblot force -1 and blot time 4 s
3D Reconstruction
Reconstruction MethodSUBTOMOGRAM AVERAGING
Number of Particles3109
Reported Resolution (Å)9.8
Resolution MethodFSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry TypePOINT
Point SymmetryC1
Map-Model Fitting and Refinement
Id1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeFEI FALCON IV (4k x 4k)
Electron Dose (electrons/Å**2)120
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelTFS KRIOS
Minimum Defocus (nm)3000
Maximum Defocus (nm)5000
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
Imaging ModeBRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
EM Software
TaskSoftware PackageVersion
VOLUME SELECTIONIMOD
VOLUME SELECTIONWarp
IMAGE ACQUISITIONFEI tomography5
CTF CORRECTIONWarp
RECONSTRUCTIONM
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION