9XAO | pdb_00009xao

Spatial structure of the antimicrobial peptide Ap9

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-1H NOESY	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	293	Bruker AVANCE III 600
2	2D 1H-13C HSQC	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	293	Bruker AVANCE III 600
3	2D 1H-1H TOCSY	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	293	Bruker AVANCE III 600
4	2D 1H-15N HSQC	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	293	Bruker AVANCE III 600
5	2D 1H-1H NOESY	100 % [U-100% 2H] D2O, 0.001 % sodium azide	100% D2O	NULL	4.8	AMBIENT Pa	293	Bruker AVANCE III 600
6	2D 1H-1H COSY	100 % [U-100% 2H] D2O, 0.001 % sodium azide	100% D2O	NULL	4.8	AMBIENT Pa	293	Bruker AVANCE III 600
14	2D 1H-1H NOESY	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	303	Bruker AVANCE III 600
13	2D 1H-13C HSQC	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	303	Bruker AVANCE III 600
12	2D 1H-1H TOCSY	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	303	Bruker AVANCE III 600
11	2D 1H-15N HSQC	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	303	Bruker AVANCE III 600
10	2D 1H-1H NOESY	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	313	Bruker AVANCE III 600
9	2D 1H-13C HSQC	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	313	Bruker AVANCE III 600
8	2D 1H-1H TOCSY	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	313	Bruker AVANCE III 600
7	2D 1H-15N HSQC	95 % H2O, 5 % [U-100% 2H] D2O, 0.001 % sodium azide	95% H2O/5% D2O	NULL	4.8	AMBIENT Pa	313	Bruker AVANCE III 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	600

NMR Refinement
Method	Details	Software
torsion angle dynamics		CYANA

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (target function)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	CYANA	3.98.13	Guntert, Mumenthaler and Wuthrich
2	structure calculation	CYANA	3.98.13	Guntert, Mumenthaler and Wuthrich
6	chemical shift assignment	CARA	1.9.1.7	Keller and Wuthrich
7	collection	TopSpin		Bruker Biospin
5	peak picking	CARA	1.9.1.7	Keller and Wuthrich