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Cryo-EM Structure of the 14-Mer ATPase Complex YsaN from the Type III Secretion System of Yersinia enterocolitica
ELECTRON MICROSCOPY
Starting Model(s)
Initial Refinement Model(s)
Type
Source
Accession Code
Details
in silico model
AlphaFold
AF-A1JQ97-F1
Refinement
RMS Deviations
Key
Refinement Restraint Deviation
f_dihedral_angle_d
3.368
f_angle_d
0.514
f_chiral_restr
0.041
f_plane_restr
0.003
f_bond_d
0.002
Sample
Cryo-EM Structure of the 14-Mer ATPase Complex YsaN from the Type III Secretion System of Yersinia enterocolitica
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
123350
Reported Resolution (Å)
4.4
Resolution Method
OTHER
Other Details
The Composite map was generated using a consensus map and a focus map in ChimeraX using volume maximum command. The resolution was estimated using map ...
The Composite map was generated using a consensus map and a focus map in ChimeraX using volume maximum command. The resolution was estimated using map alone (d99). The software used for the resolution estimation is Mtriage (Phenix).