Experiment: 9WAB

Solution structure of holo Acyl carrier protein from Escherichia coli

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.5 mM [U-100% 15N] Acyl carrier protein, 25 mM MES, 5 mM calcium chloride, 5 mM DTT, 0.02 % sodium azide	90% H2O/10% D2O	5 mM	6.1	1 atm	298	Bruker AVANCE III HD 700
2	3D HNCO	0.5 mM [U-100% 13C; U-100% 15N] Acyl carrier protein, 25 mM MES, 5 mM calcium chloride, 5 mM DTT, 0.02 % sodium azide	90% H2O/10% D2O	5 mM	6.1	1 atm	298	Bruker AVANCE III HD 700
3	3D HNCACB	0.5 mM [U-100% 13C; U-100% 15N] Acyl carrier protein, 25 mM MES, 5 mM calcium chloride, 5 mM DTT, 0.02 % sodium azide	90% H2O/10% D2O	5 mM	6.1	1 atm	298	Bruker AVANCE III HD 700
4	3D CBCA(CO)NH	0.5 mM [U-100% 13C; U-100% 15N] Acyl carrier protein, 25 mM MES, 5 mM calcium chloride, 5 mM DTT, 0.02 % sodium azide	90% H2O/10% D2O	5 mM	6.1	1 atm	298	Bruker AVANCE III HD 700
5	3D HBHA(CO)NH	0.5 mM [U-100% 13C; U-100% 15N] Acyl carrier protein, 25 mM MES, 5 mM calcium chloride, 5 mM DTT, 0.02 % sodium azide	90% H2O/10% D2O	5 mM	6.1	1 atm	298	Bruker AVANCE III HD 700
6	3D H(CCO)NH	0.5 mM [U-100% 13C; U-100% 15N] Acyl carrier protein, 25 mM MES, 5 mM calcium chloride, 5 mM DTT, 0.02 % sodium azide	90% H2O/10% D2O	5 mM	6.1	1 atm	298	Bruker AVANCE III HD 700
7	3D C(CO)NH	0.5 mM [U-100% 13C; U-100% 15N] Acyl carrier protein, 25 mM MES, 5 mM calcium chloride, 5 mM DTT, 0.02 % sodium azide	90% H2O/10% D2O	5 mM	6.1	1 atm	298	Bruker AVANCE III HD 700
8	2D 1H-1H NOESY	0.5 mM Acyl carrier protein, 25 mM MES, 5 mM calcium chloride, 5 mM DTT, 0.02 % sodium azide	90% H2O/10% D2O	5 mM	6.1	1 atm	298	Bruker AVANCE III HD 700
9	3D 1H-15N NOESY	0.5 mM [U-100% 15N] Acyl carrier protein, 25 mM MES, 5 mM calcium chloride, 5 mM DTT, 0.02 % sodium azide	90% H2O/10% D2O	5 mM	6.1	1 atm	298	Bruker AVANCE III HD 700
10	3D 1H-13C NOESY	0.5 mM [U-100% 13C; U-100% 15N] Acyl carrier protein, 25 mM MES, 5 mM calcium chloride, 5 mM DTT, 0.02 % sodium azide	90% H2O/10% D2O	5 mM	6.1	1 atm	298	Bruker AVANCE III HD 700
11	3D HCCH-TOCSY	0.5 mM [U-100% 13C; U-100% 15N] Acyl carrier protein, 25 mM MES, 5 mM calcium chloride, 5 mM DTT, 0.02 % sodium azide	90% H2O/10% D2O	5 mM	6.1	1 atm	298	Bruker AVANCE III HD 700

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE II	900
2	Bruker	AVANCE III HD	700

NMR Refinement
Method	Details	Software
na		PONDEROSA-C/S

NMR Ensemble Information
Conformer Selection Criteria	all calculated structures submitted
Conformers Calculated Total Number	20
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	PONDEROSA-C/S		Lee, Stark and Markley
2	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
3	chemical shift calculation	PONDEROSA-C/S		Lee, Stark and Markley
4	chemical shift assignment	NMRFAM-SPARKY		Lee, Tonelli and Markley
5	peak picking	NMRFAM-SPARKY		Lee, Tonelli and Markley
6	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
7	collection	TopSpin		Bruker Biospin

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9WAB | pdb_00009wab

Solution structure of holo Acyl carrier protein from Escherichia coli