9UVY | pdb_00009uvy

Cryo-EM structure of Vasopressin receptor 2 (V2R)-ARK1 with tolvaptan

ELECTRON MICROSCOPY

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Refinement

RMS Deviations
Key	Refinement Restraint Deviation
r_lrange_it	39.124
r_lrange_other	39.123
r_scangle_it	22.824
r_scangle_other	22.821
r_mcangle_it	16.116
r_mcangle_other	16.114
r_dihedral_angle_2_deg	14.399
r_dihedral_angle_3_deg	14.163
r_scbond_it	13.19
r_scbond_other	13.188
r_dihedral_angle_6_deg	11.242
r_mcbond_it	9.823
r_mcbond_other	9.82
r_dihedral_angle_1_deg	5.165
r_angle_refined_deg	1.657
r_angle_other_deg	0.662
r_nbd_refined	0.221
r_xyhbond_nbd_refined	0.178
r_nbtor_refined	0.165
r_symmetry_nbd_other	0.148
r_chiral_restr	0.09
r_symmetry_nbtor_other	0.064
r_bond_refined_d	0.006
r_gen_planes_refined	0.006
r_gen_planes_other	0.003
r_ext_dist_refined_b	0.001
r_bond_other_d

Sample
Cryo-EM structure of Vasopressin receptor 2 (V2R)-ARK1 with tolvaptan

Specimen Preparation
Sample Aggregation State	PARTICLE

3D Reconstruction
Reconstruction Method	SINGLE PARTICLE
Number of Particles	201250
Reported Resolution (Å)	2.98
Resolution Method	FSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry Type	POINT

Map-Model Fitting and Refinement
Id	1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details

Data Acquisition
Detector Type	GATAN K3 BIOQUANTUM (6k x 4k)
Electron Dose (electrons/Å**2)	45.4

Imaging Experiment	1
Date of Experiment
Temperature (Kelvin)
Microscope Model	TFS KRIOS
Minimum Defocus (nm)	800
Maximum Defocus (nm)	1600
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS	2.7
Imaging Mode	BRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
Source	FIELD EMISSION GUN
Acceleration Voltage (kV)	300
Imaging Details

Image Processing
CTF Correction Type	CTF Correction Details	Number of Particles Selected	Particle Selection Details
NONE