9UVW | pdb_00009uvw

Cryo-EM structure of Vasopressin receptor 2 (V2R)-BRIL/anti BRIL SRP2070 Fab antibody complex with tolvaptan, focused on receptor

ELECTRON MICROSCOPY

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Refinement

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	27.318
r_lrange_it	26.128
r_lrange_other	26.127
r_scangle_it	16.08
r_scangle_other	16.075
r_dihedral_angle_3_deg	13.665
r_mcangle_other	13.533
r_mcangle_it	13.524
r_dihedral_angle_6_deg	11.591
r_scbond_it	9.422
r_scbond_other	9.418
r_mcbond_it	8.114
r_mcbond_other	8.057
r_dihedral_angle_1_deg	4.86
r_angle_refined_deg	1.486
r_angle_other_deg	0.649
r_nbd_refined	0.241
r_nbtor_refined	0.184
r_symmetry_nbd_other	0.164
r_xyhbond_nbd_refined	0.129
r_chiral_restr	0.085
r_symmetry_nbtor_other	0.066
r_gen_planes_refined	0.007
r_bond_refined_d	0.006
r_gen_planes_other	0.004
r_bond_other_d

Sample
Cryo-EM structure of Vasopressin receptor 2 (V2R)-BRIL/anti BRIL SRP2070 Fab antibody complex with tolvaptan, focused on receptor

Specimen Preparation
Sample Aggregation State	PARTICLE

3D Reconstruction
Reconstruction Method	SINGLE PARTICLE
Number of Particles	195895
Reported Resolution (Å)	2.89
Resolution Method	FSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry Type	POINT

Map-Model Fitting and Refinement
Id	1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details

Data Acquisition
Detector Type	GATAN K3 BIOQUANTUM (6k x 4k)
Electron Dose (electrons/Å**2)	50

Imaging Experiment	1
Date of Experiment
Temperature (Kelvin)
Microscope Model	TFS KRIOS
Minimum Defocus (nm)	800
Maximum Defocus (nm)	1600
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS	2.7
Imaging Mode	BRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
Source	FIELD EMISSION GUN
Acceleration Voltage (kV)	300
Imaging Details

Image Processing
CTF Correction Type	CTF Correction Details	Number of Particles Selected	Particle Selection Details
NONE