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Giraffe KIF5A motor domain in nucleotide free state bound to microtubule
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 9UMM
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.062 f_angle_d 0.56 f_chiral_restr 0.04 f_bond_d 0.003 f_plane_restr 0.003
Sample gcKIF5A is attached to microtubule
Specimen Preparation Sample Aggregation State FILAMENT Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method HELICAL Number of Particles 28333 Reported Resolution (Å) 4.4 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type HELICAL Axial Symmetry C14 Axial Rise 8.9 Angular Rotation -25.8
Map-Model Fitting and Refinement Id 1 (9UMM) Refinement Space Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 50
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TECNAI ARCTICA Minimum Defocus (nm) 1500 Maximum Defocus (nm) 2700 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 200 Imaging Details
EM Software Task Software Package Version MODEL REFINEMENT PHENIX
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details NONE