☰ Navigation Tabs
E. coli 70S ribosome from delta-RlmE strain, PTC class 7
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 9SYH
Refinement RMS Deviations Key Refinement Restraint Deviation s_angle_nonh_d 1.51161106 s_bond_nonh_d 0.0106412556
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 51232 Reported Resolution (Å) 2.33 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 (9SYH) Refinement Space REAL Refinement Protocol FLEXIBLE FIT Refinement Target Overall B Value 29.43 Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 BIOQUANTUM (6k x 4k) Electron Dose (electrons/Å**2) 42.1
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 700 Maximum Defocus (nm) 1500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC IMAGE ACQUISITION EPU 2.12.1 CTF CORRECTION cryoSPARC 4.4 MODEL FITTING Coot 0.9.8.95 INITIAL EULER ASSIGNMENT cryoSPARC FINAL EULER ASSIGNMENT cryoSPARC 4.4 CLASSIFICATION cryoSPARC 4.4 RECONSTRUCTION cryoSPARC 4.4 MODEL REFINEMENT Servalcat 0.4.77
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 736925