☰ Navigation Tabs
Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate b (composite structure)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details other Other
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 4.158 f_angle_d 0.486 f_chiral_restr 0.041 f_plane_restr 0.003 f_bond_d 0.002
Sample FmdABCGF region of the (MvhABGD-HdrABC)2-(FmdABCDG)4 flavin-bifurcating CO2-fixing enzyme of M. marburgensis
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 14332 Reported Resolution (Å) 3.25 Resolution Method FSC 0.143 CUT-OFF Other Details Particles had been C2 expanded Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON IV (4k x 4k) Electron Dose (electrons/Å**2) 60
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 700 Maximum Defocus (nm) 2400 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION IMAGE ACQUISITION EPU MODEL FITTING UCSF ChimeraX MODEL REFINEMENT Coot INITIAL EULER ASSIGNMENT RELION FINAL EULER ASSIGNMENT cryoSPARC RECONSTRUCTION cryoSPARC
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 917008