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Mouse otoferlin (216-1931) in the lipid-free, Ca2+-bound state, "open" conformation (class 2)
ELECTRON MICROSCOPY
Starting Model(s)
Initial Refinement Model(s)
Type
Source
Accession Code
Details
in silico model
AlphaFold
Refinement
RMS Deviations
Key
Refinement Restraint Deviation
f_dihedral_angle_d
6.3604
f_angle_d
0.9021
f_chiral_restr
0.0517
f_plane_restr
0.0073
f_bond_d
0.0041
Sample
Mouse otoferlin (residues 216-1931) in the lipid-free, Ca2+-bound state
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE-PROPANE
Sample Vitrification Details
After the application of ~3 uL sample (A280~0.42), the grid was blotted for 9 s with a blot force of 3, then plunged into liquid ethane/propane cooled ...
After the application of ~3 uL sample (A280~0.42), the grid was blotted for 9 s with a blot force of 3, then plunged into liquid ethane/propane cooled by liquid nitrogen.