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Inner Curvature of Thick Flagellar Filament from T.denticola
ELECTRON MICROSCOPY
Starting Model(s)
Initial Refinement Model(s)
Type
Source
Accession Code
Details
experimental model
Other
Refinement
RMS Deviations
Key
Refinement Restraint Deviation
f_dihedral_angle_d
14.6769
f_angle_d
0.6482
f_chiral_restr
0.0479
f_plane_restr
0.003
f_bond_d
0.002
Sample
assymmetric region of the outer sheath (located at the inner curvature) of thick flagellar filaments purified from planktonic T. denticola
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
LEICA EM GP
Cryogen Name
ETHANE
Sample Vitrification Details
The sample was back blotted
3D Reconstruction
Reconstruction Method
HELICAL
Number of Particles
56413
Reported Resolution (Å)
2.9
Resolution Method
FSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry Type
POINT
Axial Symmetry
C1
Axial Rise
0.0001
Angular Rotation
Map-Model Fitting and Refinement
Id
1
Refinement Space
REAL
Refinement Protocol
OTHER
Refinement Target
Overall B Value
Fitting Procedure
Details
ModelAngelo automated the model builder was used to generate the initial model for refinement. This first given the full proteome for T.denticola and ...
ModelAngelo automated the model builder was used to generate the initial model for refinement. This first given the full proteome for T.denticola and subsequently a fasta file containing the amino acids for only the relevant proteins.