☰ Navigation Tabs
Human ClpP initial assembly
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 9DVY
Sample Human ClpX-bound ClpP
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details The sample was prepared using manual blot-and-plunge freezing method in cold room (4 degrees Celsius).
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 26419 Reported Resolution (Å) 3.7 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 (9DVY) Refinement Space REAL Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 50
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TALOS ARCTICA Minimum Defocus (nm) 230 Maximum Defocus (nm) 3300 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 3.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 45000 Calibrated Magnification 54945 Source FIELD EMISSION GUN Acceleration Voltage (kV) 200 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC 4.7.0 MODEL REFINEMENT PHENIX 1.21_5207 RECONSTRUCTION cryoSPARC 4.7.0
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 1940578