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Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V2C3
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 5.724 f_angle_d 0.694 f_chiral_restr 0.048 f_plane_restr 0.006 f_bond_d 0.004
Sample Venezuelan equine encephalitis virus in complex with single domain antibody V2C3
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 726375 Reported Resolution (Å) 6 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type DIRECT ELECTRON APOLLO (4k x 4k) Electron Dose (electrons/Å**2) 40
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 800 Maximum Defocus (nm) 2000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION SerialEM CTF CORRECTION cryoSPARC 4.4.3 MODEL FITTING UCSF Chimera 1.14 MODEL REFINEMENT PHENIX dev-5245 INITIAL EULER ASSIGNMENT cryoSPARC 4.4.3 FINAL EULER ASSIGNMENT cryoSPARC 4.4.3 CLASSIFICATION cryoSPARC 4.4.3 RECONSTRUCTION cryoSPARC 4.4.3
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 31101