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Clostridioides difficile Toxin A with mCDIFA-248-25 Fab
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 5.199 f_angle_d 0.761 f_chiral_restr 0.053 f_plane_restr 0.005 f_bond_d 0.004
Sample Clostridioides difficile Toxin A with mCDIFA-248-25 Fab
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 212265 Reported Resolution (Å) 3.2 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 52.2
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 1500 Maximum Defocus (nm) 2500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 165000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION Warp 1.0.9 PARTICLE SELECTION RELION 3.1.0 IMAGE ACQUISITION SerialEM CTF CORRECTION CTFFIND 4 INITIAL EULER ASSIGNMENT RELION 3.1.0 FINAL EULER ASSIGNMENT RELION 3.1.0 MODEL REFINEMENT PHENIX 1.20_3594
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details NONE 527742