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Mn-MAHF-9 A8S Metal Alpha-Helix Framework
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 7TLS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 SLOW COOLING 298 acetonitrile, water, manganese acetate, sodium hydroxide
Crystal Properties Matthews coefficient Solvent content 1.61 23.71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 10.32 α = 81.28 b = 16.27 β = 84.88 c = 20.66 γ = 71.62
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2024-01-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID30B 0.68880 ESRF ID30B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.11 15.31 98.46 0.976 15.15 5.6 4925 3.43
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.11 1.15 0.2181 0.94
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1.11 15.31 1.96 4925 966 96.35 0.1333 0.13 0.1335 0.161 0.163 4.38
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 24.7529 f_angle_d 1.6294 f_chiral_restr 0.0576 f_bond_d 0.0077 f_plane_restr 0.0046
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 134 Nucleic Acid Atoms Solvent Atoms 21 Heterogen Atoms 9
Software Software Software Name Purpose PHENIX refinement XDS data reduction XDS data scaling PHASER phasing