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D14.F25.S02 Fab complexed to DENV2-US/BID/V594/2006 virus (5f-3f map)
ELECTRON MICROSCOPY
Starting Model(s)
Initial Refinement Model(s)
Type
Source
Accession Code
Details
in silico model
SwissModel
in silico model
AlphaFold
Sample
dengue virus type 2
Sample Components
Monoclonal antibody D14.F25.S02
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
LEICA EM GP
Cryogen Name
ETHANE
Sample Vitrification Details
GP2
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
2305
Reported Resolution (Å)
4.09
Resolution Method
FSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry Type
POINT
Point Symmetry
I
Map-Model Fitting and Refinement
Id
1
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
Overall B Value
Fitting Procedure
Details
E-protein model was built using EMProt and Fab model was predicted from Alphafold. Realspace refined model from high resolution focused map was taken ...
E-protein model was built using EMProt and Fab model was predicted from Alphafold. Realspace refined model from high resolution focused map was taken for rigid body. Map to model correlation is 0.84.