Solid-state NMR Structure of VsSemiSWEET in Lipid Bilayers
SOLID-STATE NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NCA | 48 % w/w [U-13C; U-15N] VsSemiSWEET, 29 % w/w E.coli Lipids, 23 % w/w H2O | 100% H2O | 1 M | 8.0 | 1 atm | 298 | Bruker AVANCE III 800 |
| 2 | 2D DARR | 48 % w/w [U-13C; U-15N] VsSemiSWEET, 29 % w/w E.coli Lipids, 23 % w/w H2O | 100% H2O | 1 M | 8.0 | 1 atm | 298 | Bruker AVANCE III 800 |
| 3 | 3D NCACX | 48 % w/w [U-13C; U-15N] VsSemiSWEET, 29 % w/w E.coli Lipids, 23 % w/w H2O | 100% H2O | 1 M | 8.0 | 1 atm | 298 | Varian INOVA 600 |
| 4 | 3D NCOCX | 48 % w/w [U-13C; U-15N] VsSemiSWEET, 29 % w/w E.coli Lipids, 23 % w/w H2O | 100% H2O | 1 M | 8.0 | 1 atm | 298 | Varian INOVA 600 |
| 5 | 3D CONCA | 48 % w/w [U-13C; U-15N] VsSemiSWEET, 29 % w/w E.coli Lipids, 23 % w/w H2O | 100% H2O | 1 M | 8.0 | 1 atm | 298 | Varian INOVA 600 |
| 6 | 2D CORD | 48 % w/w [2-13C; U-15N] VsSemiSWEET, 29 % w/w E.coli lipids, 23 % w/w H2O | 100% H2O | 1 M | 8.0 | 1 atm | 298 | Bruker AVANCE III 800 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III | 800 |
| 2 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| molecular dynamics | X-PLOR NIH | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 1024 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | chemical shift assignment | NMRFAM-SPARKY | 2.6 | T. D. Goddard and D. G. Kneller |
| 2 | structure calculation | X-PLOR NIH | 2.47 | Schwieters, Kuszewski, Tjandra and Clore |
| 3 | collection | TopSpin | 3.6 | Bruker Biospin |
| 4 | processing | NMRPipe | 3.0 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |














