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Structure of ForCE lacking the Helical Membrane Plug-in (HMP; DUF1641)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other Phasing using an initial WT crystal structure solved using iron and gadolinium anomalous signal; later solved again using AF model
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 0.18M tri-Ammonium citrate, 2.2M Ammonium sulfate
Crystal Properties Matthews coefficient Solvent content 4.72 73.92
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 215.909 α = 90 b = 215.909 β = 90 c = 215.528 γ = 90
Symmetry Space Group I 4 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2021-10-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-2 1.73404 ESRF ID23-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.626 152.7 99.6 0.99 6.3 3.7 54862
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.63 3.72 0.159 0.35
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3.626 44.06 29022 1524 99.6 0.2821 0.28 0.2787 0.3195 0.3135 RANDOM 158.95
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 37.6066 37.6066 -75.2132
RMS Deviations Key Refinement Restraint Deviation t_other_torsion 21.03 t_omega_torsion 2.28 t_angle_deg 0.91 t_bond_d 0.007 t_dihedral_angle_d t_gen_planes t_it t_chiral_improper_torsion t_ideal_dist_contact
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8501 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 131
Software Software Software Name Purpose BUSTER refinement XDS data reduction Aimless data scaling MOLREP phasing