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Sulfolobus acidocaldarius AAP filament
Refinement RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.277 r_long_range_B_refined 15.572 r_dihedral_angle_3_deg 11.798 r_dihedral_angle_4_deg 11.453 r_dihedral_angle_1_deg 6.911 r_mcangle_it 6.318 r_scbond_it 4.662 r_mcbond_it 3.527 r_angle_refined_deg 1.945 r_chiral_restr 0.085
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.277 r_long_range_B_refined 15.572 r_dihedral_angle_3_deg 11.798 r_dihedral_angle_4_deg 11.453 r_dihedral_angle_1_deg 6.911 r_mcangle_it 6.318 r_scbond_it 4.662 r_mcbond_it 3.527 r_angle_refined_deg 1.945 r_chiral_restr 0.085 r_bond_refined_d 0.006 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Specimen Preparation Sample Aggregation State FILAMENT Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method HELICAL Number of Particles 505862 Reported Resolution (Å) 2.6 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type HELICAL Axial Symmetry C1 Axial Rise 15.52 Angular Rotation -39.86
Map-Model Fitting and Refinement Id 1 Refinement Space RECIPROCAL Refinement Protocol FLEXIBLE FIT Refinement Target Overall B Value Fitting Procedure Details Jligand was used for preparing dictionaries for an unusual sugars
Data Acquisition Detector Type GATAN K3 BIOQUANTUM (6k x 4k) Electron Dose (electrons/Å**2) 40
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 500 Maximum Defocus (nm) 2100 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC 4.4.1 IMAGE ACQUISITION EPU 3.5 CTF CORRECTION cryoSPARC 4.4.1 MODEL FITTING Coot MODEL FITTING UCSF ChimeraX MODEL FITTING ISOLDE MODEL REFINEMENT REFMAC 5.8.0267 RECONSTRUCTION cryoSPARC 4.4.1
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION