Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
Cryo-EM grids were prepared by freezing using a manual plunger in cold room at 4C
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
22780
Reported Resolution (Å)
8
Resolution Method
OTHER
Other Details
3D FSC server is used to compute map-model resolution at the threshold of 0.5. This reported resolution is not the map resolution because it is a comp ...
3D FSC server is used to compute map-model resolution at the threshold of 0.5. This reported resolution is not the map resolution because it is a composite map that does not have two half maps.
Refinement Type
Symmetry Type
POINT
Point Symmetry
C2
Map-Model Fitting and Refinement
Id
1 (6PUT, 1IHV, 1K6Y, 7Z1Z, 1EX4)
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
Correlation coefficient
Overall B Value
Fitting Procedure
Details
Domains of HIV-1 IN were rigid-body docked into cryo-EM density without any further refinement or adjustment of the coordinates. This rigid-body docke ...
Domains of HIV-1 IN were rigid-body docked into cryo-EM density without any further refinement or adjustment of the coordinates. This rigid-body docked model was then truncated to poly-Alanine and deposited here.