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UIC-1 soaked in equimolar benzene, toluene, isopropylbenzene, and ortho-xylene
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 7TLS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 SLOW COOLING 298 acetonitrile, water
Crystal Properties Matthews coefficient Solvent content 1.5 17.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 13.853 α = 90 b = 13.33 β = 90.73 c = 28.67 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2024-05-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX IV BEAMLINE BioMAX 0.688801 MAX IV BioMAX
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 0.97 12.09 98.35 0.999 21.33 6.5 6310 7.63
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 0.97 1.005 0.968
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 0.97 12.09 1.38 6310 1165 97.69 0.0991 0.0973 0.0974 0.1112 0.1112 12.87
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 39.319 f_angle_d 1.9829 f_chiral_restr 0.0481 f_bond_d 0.0101 f_plane_restr 0.0073
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 81 Nucleic Acid Atoms Solvent Atoms 2 Heterogen Atoms 58
Software Software Software Name Purpose PHENIX refinement XDS data reduction XDS data scaling PHASER phasing