8RAJ

NMR structure of PKS docking domains

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-13C HSQC	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
6	2D 1H-13C HSQC	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
2	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
7	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
3	3D HNCA	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
8	3D HNCA	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
4	3D HNCO	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
9	3D HNCO	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
10	3D HNCACB	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
11	3D HNCACB	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
12	3D HN(CA)CO	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
13	3D HN(CA)CO	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
14	3D CBCA(CO)NH	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
15	3D CBCA(CO)NH	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
17	3D HCCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
18	3D HCCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
16	3D CCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
19	3D CCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
20	3D C(CO)NH	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
23	3D C(CO)NH	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
21	3D H(CCO)NH	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
22	3D H(CCO)NH	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
24	3D 1H-13C NOESY	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
25	3D 1H-13C NOESY	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
27	3D 1H-15N NOESY	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
26	3D 1H-15N NOESY	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
28	3D 1H-13C NOESY aromatic	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
29	3D 1H-13C NOESY aromatic	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
33	3D HNHA	1 mM [U-100% 13C; U-100% 15N] TobC, 2 mM TobE, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600
32	3D HNHA	1 mM [U-100% 13C; U-100% 15N] TobE, 2 mM TobC, 100 mM sodium phosphate	90% H2O/10% D2O	100 mM	6.5	1 atm	298	Bruker AVANCE III 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	600

NMR Refinement
Method	Details	Software
simulated annealing		Amber

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	200
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	Amber		Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
2	structure calculation	CYANA		Guntert, Mumenthaler and Wuthrich
3	chemical shift assignment	NMRFAM-SPARKY		Lee W, Tonelli M, Markley JL
5	peak picking	NMRFAM-SPARKY		Lee W, Tonelli M, Markley JL
6	chemical shift assignment	CcpNmr Analysis Assign		Vranken WF, Boucher W, Stevens TJ, Fogh RH, Pajon A, Llinas M, Ulrich EL, Markley JL, Ionides J, and Laue ED.