8Y4Z

Monomeric HERC5 HECT c-lobe structure in solution


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC20 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 2 mM TCEP, 20 uM DSS95% H2O/5% D2O100 mM7.4AMBIENT Pa293Bruker AVANCE NEO 900
23D HNCO20 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 2 mM TCEP, 20 uM DSS95% H2O/5% D2O100 mM7.4AMBIENT Pa293Bruker AVANCE NEO 900
33D HN(CA)CO20 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 2 mM TCEP, 20 uM DSS95% H2O/5% D2O100 mM7.4AMBIENT Pa293Bruker AVANCE NEO 900
43D HNCACB20 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 2 mM TCEP, 20 uM DSS95% H2O/5% D2O100 mM7.4AMBIENT Pa293Bruker AVANCE NEO 900
53D HN(COCA)CB20 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 2 mM TCEP, 20 uM DSS95% H2O/5% D2O100 mM7.4AMBIENT Pa293Bruker AVANCE NEO 900
113D 1H-13C NOESY aliphatic20 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 2 mM TCEP, 20 uM DSS95% H2O/5% D2O100 mM7.4AMBIENT Pa293Bruker AVANCE III 950
103D 1H-13C NOESY aromatic20 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 2 mM TCEP, 20 uM DSS95% H2O/5% D2O100 mM7.4AMBIENT Pa293Bruker AVANCE III 950
93D 1H-15N NOESY20 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 2 mM TCEP, 20 uM DSS95% H2O/5% D2O100 mM7.4AMBIENT Pa293Bruker AVANCE III 950
83D H(CCO)NH20 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 2 mM TCEP, 20 uM DSS95% H2O/5% D2O100 mM7.4AMBIENT Pa293Bruker AVANCE III 700
73D HCCH-TOCSY20 mM sodium phosphate, 100 mM sodium chloride, 3 mM DTT, 2 mM TCEP, 20 uM DSS95% H2O/5% D2O100 mM7.4AMBIENT Pa293Bruker AVANCE III 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III950
2BrukerAVANCE NEO900
3BrukerAVANCE NEO1200
4BrukerAVANCE III800
5BrukerAVANCE III700
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsPoky
torsion angle dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number400
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCYANA3.98.15Guntert, Mumenthaler and Wuthrich
7refinementPokyManthey, Tonelli, Clos II, Rahimi, Markley and Lee
8structure calculationX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
6chemical shift assignmentPokyManthey, Tonelli, Clos II, Rahimi, Markley and Lee
2data analysisPoky3.98.15Manthey, Tonelli, Clos II, Rahimi, Markley and Lee
5peak pickingPokyManthey, Tonelli, Clos II, Rahimi, Markley and Lee