8X87

The Crystal Structure of HspBP1 from Biortus.

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	1XQR

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP		293	20mM Tris-HCl (pH 8.0), 100mM NaCl, 1mM MgCl2

Crystal Properties
Matthews coefficient	Solvent content
2.36	47.82

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 76.931	α = 90
b = 89.411	β = 90
c = 84.68	γ = 90

Symmetry
Space Group	P 1 21 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS3 6M		2021-12-03	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	CLSI BEAMLINE 08ID-1	1.18053	CLSI	08ID-1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.2	48.03	97.8	0.082	10.7	3.5		56950

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.2	2.26	96.8		0.627	2.2

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	2.2	48	56929	2854	97.625	0.202	0.1992	0.2491	34.488

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
3.76		0.038	-2.439		-1.321

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_3_deg	16.358
r_dihedral_angle_6_deg	14.985
r_lrange_other	8.243
r_lrange_it	8.235
r_dihedral_angle_2_deg	7.03
r_scangle_it	6.632
r_scangle_other	6.631
r_dihedral_angle_1_deg	6.295
r_mcangle_it	4.648
r_mcangle_other	4.648
r_scbond_it	4.072
r_scbond_other	4.071
r_mcbond_it	3.002
r_mcbond_other	3.001
r_angle_refined_deg	1.381
r_angle_other_deg	0.466
r_nbd_refined	0.211
r_xyhbond_nbd_refined	0.199
r_symmetry_xyhbond_nbd_refined	0.194
r_symmetry_nbd_refined	0.178
r_symmetry_nbd_other	0.176
r_nbtor_refined	0.166
r_nbd_other	0.164
r_ncsr_local_group_6	0.073
r_symmetry_nbtor_other	0.072
r_ncsr_local_group_3	0.072
r_ncsr_local_group_5	0.07
r_chiral_restr	0.069
r_ncsr_local_group_1	0.069
r_ncsr_local_group_2	0.067
r_ncsr_local_group_4	0.066
r_symmetry_xyhbond_nbd_other	0.057
r_bond_refined_d	0.007
r_gen_planes_refined	0.005
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	8240
Nucleic Acid Atoms
Solvent Atoms	604
Heterogen Atoms

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing