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Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) stabilized in a prefusion-like conformation in complex with 1G2 and 7H3, composite map (global and local) and model
ELECTRON MICROSCOPY
Refinement
RMS Deviations
Key
Refinement Restraint Deviation
f_dihedral_angle_d
11.31
f_angle_d
0.411
f_chiral_restr
0.041
f_plane_restr
0.004
f_bond_d
0.001
Sample
Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) stabilized in a prefusion-like conformation in complex with 1G2 and 7H3
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
165982
Reported Resolution (Å)
2.8
Resolution Method
FSC 0.143 CUT-OFF
Other Details
A mask was created around gB structural domain I (DI) and 1G2 using ChimeraX and imported to cryoSPARC for local refinement. The resulting local map w ...
A mask was created around gB structural domain I (DI) and 1G2 using ChimeraX and imported to cryoSPARC for local refinement. The resulting local map was combined with the global map using PHENIX combine_focused_maps