8UKC
Solution NMR Structure of the lasso peptide chlorolassin
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 6 mM lassopeptide | 50% H2O/50% ACN-d3 | 0 mM | 6.5 | 1 atm | 313.15 | Varian VNMRS 750 |
2 | 2D 1H-1H NOESY | 6 mM lassopeptide | 50% H2O/50% ACN-d3 | 0 mM | 6.5 | 1 atm | 313.15 | Varian VNMRS 750 |
3 | 2D 1H-13C HSQC | 6 mM lassopeptide | 50% H2O/50% ACN-d3 | 0 mM | 6.5 | 1 atm | 313.15 | Varian VNMRS 750 |
4 | 2D 1H-13C HMBC | 6 mM lassopeptide | 50% H2O/50% ACN-d3 | 0 mM | 6.5 | 1 atm | 313.15 | Varian VNMRS 750 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | VNMRS | 750 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | X-PLOR NIH |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (medoid) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | VnmrJ | 4.2 | VnmrJ 4.2 Biopack |
2 | refinement | X-PLOR NIH | 2.51 | Schwieters, Kuszewski, Tjandra and Clore |
3 | chemical shift assignment | MestreLab (Mnova / MestReNova / MestReC) | 14.3.0 | Mestrelab Research S.L. |
4 | data analysis | Sparky | Goddard | |
5 | structure calculation | X-PLOR NIH | 2.51 | Schwieters, Kuszewski, Tjandra and Clore |