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KCTD5/Cullin3/Gbeta1gamma2 Complex: State B From Composite RELION Multi-body Refinement Map
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3DRX experimental model PDB 4EOZ experimental model PDB 6VMS
Sample KCTD5/Cullin3/GBetaGamma Pentamer
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 48895 Reported Resolution (Å) 3.84 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (3DRX, 4EOZ, 6VMS, 6VMS) Refinement Space REAL Refinement Protocol FLEXIBLE FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON IV (4k x 4k) Electron Dose (electrons/Å**2) 49.35
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN Minimum Defocus (nm) 250 Maximum Defocus (nm) 1500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC MODEL FITTING UCSF ChimeraX 1.5 MODEL FITTING Coot 0.96 MODEL FITTING ISOLDE 1.5 RECONSTRUCTION RELION MODEL REFINEMENT PHENIX 1.20.1-4487 MODEL REFINEMENT NAMD 2.14 MODEL REFINEMENT VMD 1.93
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 4103962