8T61
Solution NMR structure of designed peptide BH33 (RHYYKFNSTGRHYHYY)
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-13C HSQC | 1.52 mM BH33 peptide | 90% H2O/10% D2O | 50 mM | 5 | 1 atm | 277.15 | Bruker Bruker AVIIIHD-800 800 |
2 | 2D 1H-15N HSQC | 1.52 mM BH33 peptide | 90% H2O/10% D2O | 50 mM | 5 | 1 atm | 277.15 | Bruker Bruker AVIIIHD-800 800 |
3 | 2D 1H-1H NOESY | 1.52 mM BH33 peptide | 90% H2O/10% D2O | 50 mM | 5 | 1 atm | 277.15 | Bruker Bruker AVIIIHD-800 800 |
4 | 2D 1H-1H TOCSY | 1.52 mM BH33 peptide | 90% H2O/10% D2O | 50 mM | 5 | 1 atm | 277.15 | Bruker Bruker AVIIIHD-800 800 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | Bruker AVIIIHD-800 | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CS-ROSETTA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 5000 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | Sparky | Goddard | |
3 | data analysis | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
2 | structure calculation | CS-ROSETTA | Shen, Vernon, Baker and Bax |