8T0G

Backbone Dialkylation in Peptide Hairpins: Natural Backbone Prototype


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY2 mM GB1 C-terminal Hairpin Mutant: Ala13 variant, 50 mM sodium phosphate, 0.2 mM DSS90% H2O/10% D2O250 mM6.31 atm298Bruker AVANCE 700
22D 1H-1H NOESY2 mM GB1 C-terminal Hairpin Mutant: Ala13 variant, 50 mM sodium phosphate, 0.2 mM DSS90% H2O/10% D2O250 mM6.31 atm298Bruker AVANCE 700
32D 1H-1H COSY2 mM GB1 C-terminal Hairpin Mutant: Ala13 variant, 50 mM sodium phosphate, 0.2 mM DSS90% H2O/10% D2O250 mM6.31 atm298Bruker AVANCE 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE700
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingTopSpinBruker Biospin
2chemical shift assignmentNMRFAM-SPARKYLee W, Tonelli M, Markley JL
3peak pickingNMRFAM-SPARKYLee W, Tonelli M, Markley JL
4refinementARIALinge, O'Donoghue and Nilges
5structure calculationARIALinge, O'Donoghue and Nilges