8T05

Structure of Ciona Myomaker bound to Fab1A1


ELECTRON MICROSCOPY

Refinement

RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.125
r_dihedral_angle_3_deg13.499
r_dihedral_angle_4_deg12.328
r_dihedral_angle_1_deg8.238
r_long_range_B_refined4.863
r_long_range_B_other4.863
r_mcangle_it2.504
r_mcangle_other2.504
r_scangle_other1.467
r_angle_refined_deg1.375
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.125
r_dihedral_angle_3_deg13.499
r_dihedral_angle_4_deg12.328
r_dihedral_angle_1_deg8.238
r_long_range_B_refined4.863
r_long_range_B_other4.863
r_mcangle_it2.504
r_mcangle_other2.504
r_scangle_other1.467
r_angle_refined_deg1.375
r_mcbond_other1.33
r_mcbond_it1.329
r_angle_other_deg1.111
r_scbond_it0.728
r_scbond_other0.728
r_chiral_restr0.071
r_gen_planes_refined0.004
r_bond_refined_d0.003
r_gen_planes_other0.002
r_bond_other_d0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Sample
Complex of Ciona robusta Myomaker with Fab1A1
Sample Components
Ciona robusta Myomaker
Fab1A1
Specimen Preparation
Sample Aggregation StatePARTICLE
Vitrification Instrument
Cryogen NameETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction MethodSINGLE PARTICLE
Number of Particles145594
Reported Resolution (Å)3.22
Resolution MethodFSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry TypePOINT
Map-Model Fitting and Refinement
Id1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeGATAN K3 (6k x 4k)
Electron Dose (electrons/Å**2)60
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelFEI TITAN KRIOS
Minimum Defocus (nm)800
Maximum Defocus (nm)1800
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
Imaging ModeBRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
EM Software
TaskSoftware PackageVersion
MODEL REFINEMENTREFMAC5.8.0267
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
NONE