Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
H. sapiens MCM bound to double stranded DNA and ORC1-6
ELECTRON MICROSCOPY
Starting Model(s)
Initial Refinement Model(s)
Type
Source
Accession Code
Details
experimental model
Other
in silico model
AlphaFold
AF-Q9Y5N6-F1
Sample
H. sapiens MCM bound to double stranded DNA and ORC1-6
Sample Components
Double stranded DNA
H. sapiens MCM
H. sapiens ORC1-5
H. sapiens ORC6
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
182341
Reported Resolution (Å)
3.6
Resolution Method
FSC 0.143 CUT-OFF
Other Details
The here represented map is a composite map of the consensus refinement and the locally refined map encompassing the ORC1-5 complex.
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
Id
1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
The models of MCM2-7-ORC6 and ORC1-5 that were refined against the consensus refinement of the MCM-ORC complex and the locally refined ORC1-5, respect ...
The models of MCM2-7-ORC6 and ORC1-5 that were refined against the consensus refinement of the MCM-ORC complex and the locally refined ORC1-5, respectively, were fitted into the composite map using rigid body docking.