8S03

NMR solution structure of the CysD2 domain of MUC2


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY0.7 mM 1H cysD290% H2O/10% D2O100 mM7Atmospheric pressure bar318Bruker AVANCE III HD 900
22D 1H-15N HSQC0.3 mM [U-100% 13C; U-100% 15N] cysD290% H2O/10% D2O100 mM7Atmospheric pressure bar318Bruker AVANCE III HD 900
32D 1H-13C HSQC0.3 mM [U-100% 13C; U-100% 15N] cysD290% H2O/10% D2O100 mM7Atmospheric pressure bar318Bruker AVANCE III HD 900
43D HNCA0.3 mM [U-100% 13C; U-100% 15N] cysD290% H2O/10% D2O100 mM7Atmospheric pressure bar318Bruker AVANCE III HD 900
53D HN(CO)CA0.3 mM [U-100% 13C; U-100% 15N] cysD290% H2O/10% D2O100 mM7Atmospheric pressure bar318Bruker AVANCE III HD 900
63D HNCACB0.3 mM [U-100% 13C; U-100% 15N] cysD290% H2O/10% D2O100 mM7Atmospheric pressure bar318Bruker AVANCE III HD 900
73D HCCH-TOCSY0.3 mM [U-100% 13C; U-100% 15N] cysD290% H2O/10% D2O100 mM7Atmospheric pressure bar318Bruker AVANCE III HD 800
83D 1H-13C NOESY aliphatic0.3 mM [U-100% 13C; U-100% 15N] cysD290% H2O/10% D2O100 mM7Atmospheric pressure bar318Bruker AVANCE III HD 900
93D 1H-15N NOESY0.3 mM [U-100% 13C; U-100% 15N] cysD290% H2O/10% D2O100 mM7Atmospheric pressure bar318Bruker AVANCE III HD 900
102D 1H-13C HSQC150.6 mM 15N Cysteine, 15N Valine cysD290% H2O/10% D2O100 mM7Atmospheric pressure bar318Bruker AVANCE III HD 900
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III HD900
2BrukerAVANCE III HD800
NMR Refinement
MethodDetailsSoftware
ENERGY MINIMIZATION6 CALCIUM BOND DISTANCES, 14 HYDROGEN BONDS, 5 DISULFIDE BONDS, YASARAYASARA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentCcpNmr Analysis2.4.2CCPN
2peak pickingCcpNmr Analysis2.4.2CCPN
3processingTopSpinBruker Biospin
4refinementYASARA2.5Yasaara inc.
5structure calculationCYANA3.0Peter Guentert