☰ Navigation Tabs
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.
Refinement RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 13.808 r_long_range_B_refined 11.586 r_long_range_B_other 11.586 r_mcangle_it 8.01 r_mcangle_other 8.01 r_scangle_other 7.757 r_dihedral_angle_1_deg 7.321 r_mcbond_it 4.818 r_mcbond_other 4.817 r_scbond_it 4.63
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 13.808 r_long_range_B_refined 11.586 r_long_range_B_other 11.586 r_mcangle_it 8.01 r_mcangle_other 8.01 r_scangle_other 7.757 r_dihedral_angle_1_deg 7.321 r_mcbond_it 4.818 r_mcbond_other 4.817 r_scbond_it 4.63 r_scbond_other 4.63 r_dihedral_angle_2_deg 2.156 r_angle_refined_deg 1 r_angle_other_deg 0.391 r_chiral_restr 0.045 r_gen_planes_refined 0.01 r_bond_refined_d 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_dihedral_angle_4_deg r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample Paenilamicin B2 bound to the 70S Escherichia coli ribosome Sample Components 70S Escherichia coli ribosome Paenilamicin B2
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE-PROPANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 13681 Reported Resolution (Å) 2.4 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON IV (4k x 4k) Electron Dose (electrons/Å**2) 60
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 400 Maximum Defocus (nm) 900 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version MODEL REFINEMENT REFMAC 5.8.0425
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION