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ABCG2 in complex with MZ82 and 5D3 Fab
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6FFC
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.3975 f_angle_d 0.6743 f_chiral_restr 0.0454 f_bond_d 0.007 f_plane_restr 0.0042
Sample ABCG2 in complex with MZ82 and 5D3 Fab
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE-PROPANE Sample Vitrification Details Grids were blotted for 2.5s with blot force 1
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 601814 Reported Resolution (Å) 2.39 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (6ffc) Refinement Space Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 BIOQUANTUM (6k x 4k) Electron Dose (electrons/Å**2) 42
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 800 Maximum Defocus (nm) 2200 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 130000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION EPU 2 CTF CORRECTION cryoSPARC 3 MODEL FITTING UCSF Chimera FINAL EULER ASSIGNMENT cryoSPARC 3 CLASSIFICATION cryoSPARC 3 RECONSTRUCTION cryoSPARC 3 MODEL REFINEMENT PHENIX
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION